BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D04SP1|AL430215
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1774 1800 0.0
>3x_Contig1774
Length = 27771
Score = 1800 bits (906), Expect = 0.0
Identities = 923/928 (99%), Gaps = 2/928 (0%)
Strand = Plus / Plus
Query: 1 aaaccgtctctagcacagttgtggtcgattagagtacccaaagcggtttgggcaatgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaccgtctctagcacagttgtggtcgattagagtacccaaagcggtttgggcaatgatg 500
Query: 61 gcaccaatcttaccagaagctgctgaaataccatgtgcggaagatctgtatctagttggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaccaatcttaccagaagctgctgaaataccatgtgcggaagatctgtatctagttggg 560
Query: 121 aaacattcaccaggaacgatgaaggttgtaacgttaggaccgaagttgaagaaaaattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacattcaccaggaacgatgaaggttgtaacgttaggaccgaagttgaagaaaaattga 620
Query: 181 cacaagacgtacaatgctaatagaccatggtcaccaatcttgtcgtaagcgaaaccaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacaagacgtacaatgctaatagaccatggtcaccaatcttgtcgtaagcgaaaccaatg 680
Query: 241 atacagaacaaaatggtcaagatgacgaaacccatcaattggattggttttctaccaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atacagaacaaaatggtcaagatgacgaaacccatcaattggattggttttctaccaatg 740
Query: 301 acatcaatggtagcgacagagacccagtaacctggcaaagaaccggcacaaattaaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acatcaatggtagcgacagagacccagtaacctggcaaagaaccggcacaaattaaaatc 800
Query: 361 aagttaccaacggcagagttgtacaactttctgtaaacgttagaagaactagcgtasc-a 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 801 aagttaccaacggcagagttgtacaactttctgtaaacgttagaagaactagcgtagcca 860
Query: 420 atagtttgcaaaataacagcggagttcaaagaaacaccgtagaaggcaacatccaacaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 atagtttgcaaaataacagcggagttcaaagaaacaccgtagaaggcaacatccaacaag 920
Query: 480 aaccatgaaccagcggtaccgatcaahatcttcatgtgcttccattggttgahatgtctg 539
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 921 aaccatgaaccagcggtaccgatcaaaatcttcatgtgcttccattggttgaaatgtctg 980
Query: 540 gtgaaatccttgaaggaggcagctggtggcttgatttccatagtttcaacggcagttgga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 gtgaaatccttgaaggaggcagctggtggcttgatttccatagtttcaacggcagttgga 1040
Query: 600 gccttttccaatttggcaatttcttcttgttcagcgttaccgtgttcaccagaagtaaac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 gccttttccaatttggcaatttcttcttgttcagcgttaccgtgttcaccagaagtaaac 1100
Query: 660 ttagcagcatcagcagcacccttgttgaagtccatgtcgacatccaaggtataacgtggg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 ttagcagcatcagcagcacccttgttgaagtccatgtcgacatccaaggtataacgtggg 1160
Query: 720 gattctgggatagtcaatctgaagtatagagcaatacaacctggtaaacaacccaaaccg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 gattctgggatagtcaatctgaagtatagagcaatacaacctggtaaacaacccaaaccg 1220
Query: 780 atcaagattctccacatttgatcacatgccttttgacaagctggaccacagttaccagtg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 atcaagattctccacatttgatcacatgccttttgacaagctggaccacagttaccagtg 1280
Query: 840 gtagcatcttccaaatcacccttgtaagcagcaaccaaaaccagagcaacgataccagca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 gtagcatcttccaaatcacccttgtaagcagcaaccaaaaccagagcaacgataccagca 1340
Query: 900 gagatttga-cccaagcttggttagcaa 926
||||||||| ||||||||||||||||||
Sbjct: 1341 gagatttgaccccaagcttggttagcaa 1368
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6649
Number of Sequences: 1807
Number of extensions: 6649
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)